Andrew D. Cherniack: search on Z-Library

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1

Multiplatform Analysis of 12 Cancer Types Reveals Molecular Classification within and across Tissues of Origin

Hoadley, Katherine A., Yau, Christina, Wolf, Denise M., Cherniack, Andrew D., Tamborero, David, Ng, Sam, Leiserson, Max D.M., Niu, Beifang, McLellan, Michael D., Uzunangelov, Vladislav, Zhang, Jiashan

Journal:

Year:

2014

Language:

english

File:

PDF, 4.59 MB

english, 2014

2

An Integrated TCGA Pan-Cancer Clinical Data Resource to Drive High-Quality Survival Outcome Analytics

Liu, Jianfang, Lichtenberg, Tara, Hoadley, Katherine A., Poisson, Laila M., Lazar, Alexander J., Cherniack, Andrew D., Kovatich, Albert J., Benz, Christopher C., Levine, Douglas A., Lee, Adrian V., Om

Journal:

Year:

2018

Language:

english

File:

PDF, 6.22 MB

english, 2018

3

Function of the Neurospora crassa mitochondrial tyrosyl-tRNA synthetase in RNA splicing. Role of the idiosyncratic N-terminal extension and different modes of interaction with different group I introns

Georg Mohr, Rachel Rennard, Andrew D Cherniack, John Stryker, Alan M Lambowitz

Journal:

Journal of Molecular Biology

Year:

2001

Language:

english

File:

PDF, 699 KB

english, 2001

4

Pan-cancer patterns of somatic copy number alteration

Zack, Travis I, Schumacher, Steven E, Carter, Scott L, Cherniack, Andrew D, Saksena, Gordon, Tabak, Barbara, Lawrence, Michael S, Zhang, Cheng-Zhong, Wala, Jeremiah, Mermel, Craig H, Sougnez, Carrie,

Journal:

Nature Genetics

Year:

2013

Language:

english

File:

PDF, 867 KB

english, 2013

5

Genomic and Functional Approaches to Understanding Cancer Aneuploidy

Taylor, Alison M., Shih, Juliann, Ha, Gavin, Gao, Galen F., Zhang, Xiaoyang, Berger, Ashton C., Schumacher, Steven E., Wang, Chen, Hu, Hai, Liu, Jianfang, Lazar, Alexander J., Cherniack, Andrew D., Be

Journal:

Year:

2018

Language:

english

File:

PDF, 2.75 MB

english, 2018

6

Cell-of-Origin Patterns Dominate the Molecular Classification of 10,000 Tumors from 33 Types of Cancer

Hoadley, Katherine A., Yau, Christina, Hinoue, Toshinori, Wolf, Denise M., Lazar, Alexander J., Drill, Esther, Shen, Ronglai, Taylor, Alison M., Cherniack, Andrew D., Thorsson, Vésteinn, Akbani, Rehan

Journal:

Year:

2018

Language:

english

File:

PDF, 7.49 MB

english, 2018

7

Comprehensive Molecular Characterization of Muscle-Invasive Bladder Cancer

Robertson, A. Gordon, Kim, Jaegil, Al-Ahmadie, Hikmat, Bellmunt, Joaquim, Guo, Guangwu, Cherniack, Andrew D., Hinoue, Toshinori, Laird, Peter W., Hoadley, Katherine A., Akbani, Rehan, Castro, Mauro A.

Journal:

Year:

2018

Language:

english

File:

PDF, 102 KB

english, 2018

8

Genetic clues can be used to predict whether early-stage cancer will form an invasive tumour

Greulich, Heidi, Cherniack, Andrew D.

Journal:

Year:

2019

Language:

english

File:

PDF, 962 KB

english, 2019

9

Genetic clues can be used to predict whether early-stage cancer will form an invasive tumour

Greulich, Heidi, Cherniack, Andrew D.

Journal:

Year:

2019

File:

PDF, 962 KB

2019

10

A Novel Device for Walking Training in Elderly Patients

E Paul Cherniack, Darlene Caprio, Andrew A Fischer, John Tuckman

Journal:

Physiotherapy (Elsevier Science)

Year:

1999

Language:

english

File:

PDF, 844 KB

english, 1999

11

Function of neurospora mitochondrial tyrosyl-tRNA synthetase in RNA splicing requires an idiosyncratic domain not found in other synthetases

Andrew D. Cherniack, Gian Garriga, J.D. Kittle Jr., Robert A. Akins, Alan M. Lambowitz

Journal:

Year:

1990

Language:

english

File:

PDF, 1.72 MB

english, 1990

12

Landscape of genomic alterations in cervical carcinomas

Ojesina, Akinyemi I., Lichtenstein, Lee, Freeman, Samuel S., Pedamallu, Chandra Sekhar, Imaz-Rosshandler, Ivan, Pugh, Trevor J., Cherniack, Andrew D., Ambrogio, Lauren, Cibulskis, Kristian, Bertelsen,

Journal:

Year:

2013

Language:

english

File:

PDF, 381 KB

english, 2013

13

Idiopathic Pulmonary Fibrosis

KING, TALMADGE E., SCHWARZ, MARVIN I., BROWN, KEVIN, TOOZE, JANET A., COLBY, THOMAS V., WALDRON, JAMES A., FLINT, ANDREW, THURLBECK, WILLIAM, CHERNIACK, REUBEN M.

Journal:

American Journal of Respiratory and Critical Care Medicine

Year:

2001

Language:

english

File:

PDF, 113 KB

english, 2001

14

The Somatic Genomic Landscape of Chromophobe Renal Cell Carcinoma

Davis, Caleb F., Ricketts, Christopher J., Wang, Min, Yang, Lixing, Cherniack, Andrew D., Shen, Hui, Buhay, Christian, Kang, Hyojin, Kim, Sang Cheol, Fahey, Catherine C., Hacker, Kathryn E., Bhanot, G

Journal:

Year:

2014

Language:

english

File:

PDF, 2.32 MB

english, 2014

15

Genetic modifiers of EGFR dependence in non-small cell lung cancer

Sharifnia, Tanaz, Rusu, Victor, Piccioni, Federica, Bagul, Mukta, Imielinski, Marcin, Cherniack, Andrew D., Pedamallu, Chandra Sekhar, Wong, Bang, Wilson, Frederick H., Garraway, Levi A., Altshuler, D

Journal:

Proceedings of the National Academy of Sciences

Year:

2014

Language:

english

File:

PDF, 1.40 MB

english, 2014

16

P-63: Activation of the Raf/Mitogen-activated protein kinase pathway is not sufficient for disassembly of Grb2/Sos or p21 ras desensitization

Klarlund, Jes K., Cherniack, Andrew D., McMahon, Martin, Czech, Michael P.

Journal:

Experimental and Clinical Endocrinology & Diabetes

Year:

1996

Language:

english

File:

PDF, 106 KB

english, 1996

17

Quantitative Assessment of Lung Pathology in Idiopathic Pulmonary Fibrosis

Cherniack, Reuben M., Colby, Thomas V., Flint, Andrew, Thurlbeck, William M., Waldron, James, Ackerson, Lynn, King, Talmadge E.

Journal:

American Review of Respiratory Disease

Year:

1991

Language:

english

File:

PDF, 1.26 MB

english, 1991

18

Identification of focally amplified lineage-specific super-enhancers in human epithelial cancers

Zhang, Xiaoyang, Choi, Peter S, Francis, Joshua M, Imielinski, Marcin, Watanabe, Hideo, Cherniack, Andrew D, Meyerson, Matthew

Journal:

Nature Genetics

Year:

2015

Language:

english

File:

PDF, 1.20 MB

english, 2015

19

Effects of Verapamil on Histamine and Carbachol-Induced Contraction of Pulmonary Tissues in Vitro

Deal, E. Chandler, Cherniack, Andrew D., Eberlin, Lisa B.

Journal:

Year:

1984

Language:

english

File:

PDF, 902 KB

english, 1984

20

Comprehensive Pan-Genomic Characterization of Adrenocortical Carcinoma

Zheng, Siyuan, Cherniack, Andrew D., Dewal, Ninad, Moffitt, Richard A., Danilova, Ludmila, Murray, Bradley A., Lerario, Antonio M., Else, Tobias, Knijnenburg, Theo A., Ciriello, Giovanni, Kim, Seungch

Journal:

Year:

2016

Language:

english

File:

PDF, 2.68 MB

english, 2016

21

Loss of the retinoblastoma binding protein 2 (RBP2) histone demethylase suppresses tumorigenesis in mice lacking Rb1 or Men1

Wenchu Lin, Jian Cao, Jiayun Liu, Michael L. Beshiri, Yuko Fujiwara, Joshua Francis, Andrew D. Cherniack, Christoph Geisen, Lauren P. Blair, Mike R. Zou, Xiaohua Shen, Dan Kawamori, Zongzhi Liu, Chiar

Journal:

Proceedings of the National Academy of Sciences

Year:

2011

Language:

english

File:

PDF, 1.84 MB

english, 2011

22

The genomic landscape and evolution of endometrial carcinoma progression and abdominopelvic metastasis

Gibson, William J, Hoivik, Erling A, Halle, Mari K, Taylor-Weiner, Amaro, Cherniack, Andrew D, Berg, Anna, Holst, Frederik, Zack, Travis I, Werner, Henrica M J, Staby, Kjersti M, Rosenberg, Mara, Stef

Journal:

Nature Genetics

Year:

2016

Language:

english

File:

PDF, 1.33 MB

english, 2016

23

Correlation of Structure and Function in Idiopathic Pulmonary Fibrosis

Cherniack, Reuben M., Colby, Thomas V., Flint, Andrew, Thurlbeck, William M., Waldron, James A., Ackerson, Lynn, Schwarz, Marvin I., King, Talmadge E.

Journal:

American Journal of Respiratory and Critical Care Medicine

Year:

1995

Language:

english

File:

PDF, 861 KB

english, 1995

24

Idiopathic Pulmonary Fibrosis: Quantitative Assessment of Lung Pathology: Comparison of a Semiquantitative and a Morphometric Histopathologic Scoring System

Hyde, Dallas M., King, Talmadge E., Mcdermott, Trudy, Waldron, James A., Colby, Thomas V., Thurlbeck, William M., Flint, Andrew, Ackerson, Lynn, Cherniack, Reuben M.

Journal:

American Review of Respiratory Disease

Year:

1992

Language:

english

File:

PDF, 756 KB

english, 1992

25

Comprehensive Pan-Genomic Characterization of Adrenocortical Carcinoma

Zheng, Siyuan, Cherniack, Andrew D., Dewal, Ninad, Moffitt, Richard A., Danilova, Ludmila, Murray, Bradley A., Lerario, Antonio M., Else, Tobias, Knijnenburg, Theo A., Ciriello, Giovanni, Kim, Seungch

Journal:

Year:

2016

Language:

english

File:

PDF, 102 KB

english, 2016

26

DNA defects, epigenetics, and gene expression in cancer-adjacent breast: a study from The Cancer Genome Atlas

Troester, Melissa A, Hoadley, Katherine A, D’Arcy, Monica, Cherniack, Andrew D, Stewart, Chip, Koboldt, Daniel C, Robertson, A Gordon, Mahurkar, Swapna, Shen, Hui, Wilkerson, Matthew D, Sandhu, Rupnin

Journal:

npj Breast Cancer

Year:

2016

Language:

english

File:

PDF, 1.81 MB

english, 2016

27

Integrated genomic characterization of oesophageal carcinoma

Kim, Jihun, Bowlby, Reanne, Mungall, Andrew J., Robertson, A. Gordon, Odze, Robert D., Cherniack, Andrew D., Shih, Juliann, Pedamallu, Chandra Sekhar, Cibulskis, Carrie, Dunford, Andrew, Meier, Samuel

Journal:

Year:

2017

Language:

english

File:

PDF, 32.72 MB

english, 2017

28

Integrated Molecular Characterization of Uterine Carcinosarcoma

Cherniack, Andrew D., Shen, Hui, Walter, Vonn, Stewart, Chip, Murray, Bradley A., Bowlby, Reanne, Hu, Xin, Ling, Shiyun, Soslow, Robert A., Broaddus, Russell R., Zuna, Rosemary E., Robertson, Gordon,

Journal:

Year:

2017

Language:

english

File:

PDF, 5.88 MB

english, 2017

29

RPC4046, A Novel Anti-interleukin-13 Antibody, Blocks IL-13 Binding to IL-13 α1 and α2 Receptors: A Randomized, Double-Blind, Placebo-Controlled, Dose-Escalation First-in-Human Study

Tripp, Catherine S., Cuff, Carolyn, Campbell, Andrew L., Hendrickson, Barbara A., Voss, Jeff, Melim, Terry, Wu, Chengbin, Cherniack, Andrew D., Kim, Kenneth

Journal:

Advances in Therapy

Year:

2017

Language:

english

File:

PDF, 1.17 MB

english, 2017

30

Comparison of Breast Cancer Molecular Features and Survival by African and European Ancestry in The Cancer Genome Atlas

Huo, Dezheng, Hu, Hai, Rhie, Suhn K., Gamazon, Eric R., Cherniack, Andrew D., Liu, Jianfang, Yoshimatsu, Toshio F., Pitt, Jason J., Hoadley, Katherine A., Troester, Melissa, Ru, Yuanbin, Lichtenberg,

Journal:

Year:

2017

Language:

english

File:

PDF, 419 KB

english, 2017

31

Integrated Genomic Characterization of Pancreatic Ductal Adenocarcinoma

Raphael, Benjamin J., Hruban, Ralph H., Aguirre, Andrew J., Moffitt, Richard A., Yeh, Jen Jen, Stewart, Chip, Robertson, A. Gordon, Cherniack, Andrew D., Gupta, Manaswi, Getz, Gad, Gabriel, Stacey B.,

Journal:

Year:

2017

Language:

english

File:

PDF, 5.58 MB

english, 2017

32

Genomic activation of PPARG reveals a candidate therapeutic axis in bladder cancer

Goldstein, Jonathan T, Berger, Ashton C., Shih, Juliann, Duke, Fujiko F, Furst, Laura, Kwiatkowski, David J., Cherniack, Andrew D., Meyerson, Matthew, Strathdee, Craig A

Journal:

Cancer Research

Year:

2017

Language:

english

File:

PDF, 1.05 MB

english, 2017

33

Comparative Molecular Analysis of Gastrointestinal Adenocarcinomas

Liu, Yang, Sethi, Nilay S., Hinoue, Toshinori, Schneider, Barbara G., Cherniack, Andrew D., Sanchez-Vega, Francisco, Seoane, Jose A., Farshidfar, Farshad, Bowlby, Reanne, Islam, Mirazul, Kim, Jaegil,

Journal:

Year:

2018

Language:

english

File:

PDF, 5.88 MB

english, 2018

34

Machine Learning Detects Pan-cancer Ras Pathway Activation in The Cancer Genome Atlas

Way, Gregory P., Sanchez-Vega, Francisco, La, Konnor, Armenia, Joshua, Chatila, Walid K., Luna, Augustin, Sander, Chris, Cherniack, Andrew D., Mina, Marco, Ciriello, Giovanni, Schultz, Nikolaus, Sanch

Journal:

Year:

2018

Language:

english

File:

PDF, 2.58 MB

english, 2018

35

Genomic and Molecular Landscape of DNA Damage Repair Deficiency across The Cancer Genome Atlas

Knijnenburg, Theo A., Wang, Linghua, Zimmermann, Michael T., Chambwe, Nyasha, Gao, Galen F., Cherniack, Andrew D., Fan, Huihui, Shen, Hui, Way, Gregory P., Greene, Casey S., Liu, Yuexin, Akbani, Rehan

Journal:

Year:

2018

Language:

english

File:

PDF, 4.90 MB

english, 2018

36

BRCA1 ensures genome integrity by eliminating estrogen-induced pathological topoisomerase II–DNA complexes

Sasanuma, Hiroyuki, Tsuda, Masataka, Morimoto, Suguru, Saha, Liton Kumar, Rahman, Md Maminur, Kiyooka, Yusuke, Fujiike, Haruna, Cherniack, Andrew D., Itou, Junji, Callen Moreu, Elsa, Toi, Masakazu, Na

Journal:

Proceedings of the National Academy of Sciences

Year:

2018

Language:

english

File:

PDF, 1.15 MB

english, 2018

37

Identification of ADAR1 adenosine deaminase dependency in a subset of cancer cells

Gannon, Hugh S., Zou, Tao, Kiessling, Michael K., Gao, Galen F., Cai, Diana, Choi, Peter S., Ivan, Alexandru P., Buchumenski, Ilana, Berger, Ashton C., Goldstein, Jonathan T., Cherniack, Andrew D., Va

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 1.78 MB

english, 2018

38

Impact of DNA damage response and repair (DDR) gene mutations on efficacy of PD-(L)1 immune checkpoint inhibition in non-small cell lung cancer

Ricciuti, Biagio, Recondo, Gonzalo, Spurr, Liam F, Li, Yvonne Y., Lamberti, Giuseppe, Venkatraman, Deepti, Umeton, Renato, Cherniack, Andrew D., Nishino, Mizuki, Sholl, Lynette M., Shapiro, Geoffrey I

Journal:

Clinical Cancer Research

Year:

2020

File:

PDF, 750 KB

2020

39

Loss of heterozygosity of essential genes represents a widespread class of potential cancer vulnerabilities

Nichols, Caitlin A., Gibson, William J., Brown, Meredith S., Kosmicki, Jack A., Busanovich, John P., Wei, Hope, Urbanski, Laura M., Curimjee, Naomi, Berger, Ashton C., Gao, Galen F., Cherniack, Andrew

Journal:

Nature Communications

Year:

2020

File:

PDF, 1.37 MB

2020

40

Ancestry-specific predisposing germline variants in cancer

Oak, Ninad, Cherniack, Andrew D., Mashl, R. Jay, Hirsch, Fred R., Ding, Li, Beroukhim, Rameen, GÃ¼mÃ¼Å, Zeynep H., Plon, Sharon E., Huang, Kuan-lin

Journal:

Genome Medicine

Year:

2020

File:

PDF, 2.71 MB

2020

41

Quantification of aneuploidy in targeted sequencing data using ASCETS

Spurr, Liam F, Touat, Mehdi, Taylor, Alison M, Dubuc, Adrian M, Shih, Juliann, Meredith, David M, Pisano, William V, Meyerson, Matthew L, Ligon, Keith L, Cherniack, Andrew D, Li, Yvonne Y, Beroukhim,

Journal:

Year:

2020

File:

PDF, 441 KB

2020